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Intron Name: Anas_platyrhynchos_platyrhynchos_5_28085202_28086160_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28085202 - 28086160

Intron Length:

959

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TTAATTTTTTGAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

QPKLKSFHHSRRDQGVSGDQ

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.5

1.12

0.6

90.6

20.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

64.5

0.33

1.7

77.2

41.6

Minor 5ss

36.3

-1.6

3.3

47.2

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

SUSD6

Ensembl Gene ID:

ENSAPLG00000014619

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023953

28014647 - 28090216

75570

ENSAPLT00000015244

28014647 - 28090216

75570