Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_28086583_28088252_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28086583 - 28088252

Intron Length:

1670

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTGGC

5'SS Class:

major

3'SS Sequence:

CCCCGCCATTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGACAT

U12 Branch Point Sequence:

AGTTTGACATTT

Flanking Amino Acid:

SLTSSEEYTDDIPLLKEA*

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

39.5

Major BPS

67.6

0.44

1.2

Major PPT

65.8

0.36

0.9

61.4

Minor 5ss

39.3

-1.2

3.1

49.2

42.4

Minor BPS

36.8

-0.9

2.3

55.82

40.6

Associated Gene:

Gene:

SUSD6

Ensembl Gene ID:

ENSAPLG00000014619

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023953

28014647 - 28090216

75570

ENSAPLT00000015244

28014647 - 28090216

75570