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Intron Name: Anas_platyrhynchos_platyrhynchos_5_28111172_28111603_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28111172 - 28111603

Intron Length:

432

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

CATTTTTCTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

AGGCTCACAACT

Flanking Amino Acid:

RIHDGIKKPKDVTEEICAAA

Intron Amino Acid Position:

330

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

1.1

80.7

33.2

Major BPS

72.7

0.56

30.1

Major PPT

82.8

0.74

0.7

81.6

30.1

Minor 5ss

25.3

-2.8

3.5

26.5

Minor BPS

46.4

-0.1

1.8

62.02

41.3

Associated Gene:

Gene:

SLC10A1

Ensembl Gene ID:

ENSAPLG00000014797

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015432

28110981 - 28115094

4114