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Intron Name: Anas_platyrhynchos_platyrhynchos_5_28114271_28114654_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28114271 - 28114654

Intron Length:

384

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCGAG

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCATCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

CATTCTTCTACT

Flanking Amino Acid:

SLVLKGDMNLSIVMTTCSTV

Intron Amino Acid Position:

134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

72.3

39.5

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

79.8

0.67

0.8

77.6

29.5

Minor 5ss

35.7

-1.6

3.3

45.9

49.3

Minor BPS

54.1

0.21

1.9

73.04

43.7

Associated Gene:

Gene:

SLC10A1

Ensembl Gene ID:

ENSAPLG00000014797

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015432

28110981 - 28115094

4114