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Intron Name: Anas_platyrhynchos_platyrhynchos_5_28132282_28136183_F

Intron Information:

Intron Rank:

141870

Intron Class:

major

Intron Phase:

Intron Coordinates:

28132282 - 28136183

Intron Length:

3902

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTCCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

TTTTCTTTCCCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

35.3

Major BPS

0.65

1.5

85.7

34.9

Major PPT

87.1

0.84

0.7

80.8

31.2

Minor 5ss

31.6

-2.1

3.3

41.1

45.4

Minor BPS

46.5

-0.2

3.6

77.59

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026369

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018817

28132189 - 28138209

6021