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Intron Name: Anas_platyrhynchos_platyrhynchos_5_2817753_2827376_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2817753 - 2827376

Intron Length:

9624

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATATGAA

5'SS Class:

major

3'SS Sequence:

ATCTCTCAAGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAA

U12 Branch Point Sequence:

GTGCCCTGAATC

Flanking Amino Acid:

LNSNSSTIYHVQEAEQEDVK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

65.3

33.8

Major BPS

73.4

0.58

0.9

75.3

29.7

Major PPT

67.7

0.4

63.8

36.4

Minor 5ss

37.6

-1.4

3.2

45.3

45.2

Minor BPS

60.8

0.32

1.5

65.87

39.5

Associated Gene:

Gene:

TUB

Ensembl Gene ID:

ENSAPLG00000013637

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038284

2794936 - 2914004

119069

ENSAPLT00000014251

2794936 - 2914004

119069