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Intron Name: Anas_platyrhynchos_platyrhynchos_5_28252293_28255427_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

28252293 - 28255427

Intron Length:

3135

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTCATCTAA

5'SS Class:

weak_major

3'SS Sequence:

GCACTGCAGCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCTAAC

U12 Branch Point Sequence:

GATCTCCTAACG

Flanking Amino Acid:

HISRFRLKAVGISQNPSFVC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.5

0.13

1.4

54.9

Major BPS

0.55

71.8

31.4

Major PPT

46.1

-0.2

1.2

37.7

Minor 5ss

38.2

-1.3

2.8

39.1

46.2

Minor BPS

53.2

-0

1.8

59.77

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023498

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035432

28252088 - 28255528

3441