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Intron Name: Anas_platyrhynchos_platyrhynchos_5_28262058_28267703_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28262058 - 28267703

Intron Length:

5646

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTGGATTTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

CTGCCTTTAACA

Flanking Amino Acid:

KGCLGVSKEGGSLSSFPSGK

Intron Amino Acid Position:

443

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.7

1.01

0.7

84.8

25.1

Major BPS

77.3

0.68

79.3

29.4

Major PPT

79.1

0.66

72.4

42.2

Minor 5ss

31.8

-2.1

3.3

42.9

44.7

Minor BPS

70.8

0.65

1.3

72.37

Associated Gene:

Gene:

SMOC1

Ensembl Gene ID:

ENSAPLG00000014966

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033009

28149694 - 28267855

118162

ENSAPLT00000015613

28149694 - 28269750

120057