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Intron Name: Anas_platyrhynchos_platyrhynchos_5_28284532_28296897_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28284532 - 28296897

Intron Length:

12366

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGAGAT

5'SS Class:

major

3'SS Sequence:

CTTGCTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAC

U12 Branch Point Sequence:

TTAGTGTTGACC

Flanking Amino Acid:

EPKWMERGISEVAERKLTVE

Intron Amino Acid Position:

624

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

0.9

72.9

31.3

Major BPS

71.3

0.53

1.1

63.1

44.5

Major PPT

85.6

0.8

80.2

31.8

Minor 5ss

32.7

-2

3.4

46.1

49.1

Minor BPS

49.2

-0

2.2

65.48

40.8

Associated Gene:

Gene:

SLC8A3

Ensembl Gene ID:

ENSAPLG00000015553

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016237

28282453 - 28385902

103450