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Intron Name: Anas_platyrhynchos_platyrhynchos_5_2829087_2908000_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2829087 - 2908000

Intron Length:

78914

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

GTTGTCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTGTTCTAATT

Flanking Amino Acid:

MQLFGVLDDEGSSL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

0.9

77.5

33.5

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

83.2

0.75

0.9

77.1

37.1

Minor 5ss

-1.5

2.9

42.4

44.3

Minor BPS

58.7

0.35

1.7

79.49

37.4

Associated Gene:

Gene:

TUB

Ensembl Gene ID:

ENSAPLG00000013637

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017248

2795193 - 2908014

112822