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Intron Name: Anas_platyrhynchos_platyrhynchos_5_28367541_28385670_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

28367541 - 28385670

Intron Length:

18130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

TTTTGTTTGTTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

78.8

35.5

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

86.1

0.81

0.9

84.6

Minor 5ss

36.6

-1.5

2.6

39.1

38.9

Minor BPS

42.8

-0.4

3.6

78.01

39.5

Associated Gene:

Gene:

SLC8A3

Ensembl Gene ID:

ENSAPLG00000015553

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021336

28282453 - 28385902

103450

ENSAPLT00000016237

28282453 - 28385902

103450