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Intron Name: Anas_platyrhynchos_platyrhynchos_5_28444_29918_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28444 - 29918

Intron Length:

1475

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGCCAT

5'SS Class:

major

3'SS Sequence:

TTTTCTTTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTACCAT

U12 Branch Point Sequence:

TGTTACGCAACT

Flanking Amino Acid:

GTNPFHWSEVEYHVISTFKR

Intron Amino Acid Position:

374

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

63.2

42.6

Major BPS

65.6

0.39

1.3

75.1

39.4

Major PPT

92.3

0.95

0.6

92.1

18.5

Minor 5ss

45.8

-0.4

2.9

61.4

44.5

Minor BPS

49.5

0.04

2.4

78.41

43.2

Associated Gene:

Gene:

FAR1

Ensembl Gene ID:

ENSAPLG00000005107

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037805

6668 - 51974

45307

ENSAPLT00000005315

16966 - 51974

35009