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Intron Name: Anas_platyrhynchos_platyrhynchos_5_28470471_28484088_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28470471 - 28484088

Intron Length:

13618

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGCACA

5'SS Class:

major

3'SS Sequence:

GTTTGCTCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

GTACTATTAACC

Flanking Amino Acid:

CNHFSAALAEILCGKEIPRW

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

67.6

39.4

Major BPS

81.9

0.79

0.8

81.9

Major PPT

75.8

0.58

0.9

37.2

Minor 5ss

32.8

-2

3.1

40.2

45.7

Minor BPS

58.5

0.25

1.6

66.92

37.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015803

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028822

28470218 - 28489645

19428

ENSAPLT00000016473

28469310 - 28519882

50573