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Intron Name: Anas_platyrhynchos_platyrhynchos_5_28484231_28485282_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28484231 - 28485282

Intron Length:

1052

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGGGCC

5'SS Class:

major

3'SS Sequence:

TGTTCTGAACTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

TTGTTCTGAACT

Flanking Amino Acid:

AVELGETFKFKESIALGTTD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

71.8

33.5

Major BPS

82.1

0.8

71.6

36.4

Major PPT

62.1

0.27

56.2

43.7

Minor 5ss

32.2

-2

3.6

42.5

38.7

Minor BPS

75.6

0.88

1.3

88.52

36.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015803

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028822

28470218 - 28489645

19428

ENSAPLT00000016473

28469310 - 28519882

50573