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Intron Name: Anas_platyrhynchos_platyrhynchos_5_28485377_28486693_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28485377 - 28486693

Intron Length:

1317

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGAAGC

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCTCATCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAC

U12 Branch Point Sequence:

CTTTCCTCATCA

Flanking Amino Acid:

FHSGIEIYGREFAYGGHPYP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

71.6

38.5

Major BPS

77.2

0.68

0.8

77.6

26.2

Major PPT

79.2

0.66

0.8

78.5

28.7

Minor 5ss

39.9

-1.1

2.8

52.3

44.5

Minor BPS

62.6

0.39

1.9

75.6

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015803

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016473

28469310 - 28519882

50573

ENSAPLT00000028822

28470218 - 28489645

19428