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Intron Name: Anas_platyrhynchos_platyrhynchos_5_28486767_28489411_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28486767 - 28489411

Intron Length:

2645

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGCTGA

5'SS Class:

major

3'SS Sequence:

TTTCTTACTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

TTTTTCTTACTG

Flanking Amino Acid:

GRFCSTLEMGYWINEYTSTL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.59

41.3

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

82.6

0.73

0.7

78.7

28.5

Minor 5ss

37.3

-1.4

38.1

46.8

Minor BPS

68.5

0.44

1.6

74.4

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015803

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028822

28470218 - 28489645

19428