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Intron Name: Anas_platyrhynchos_platyrhynchos_5_28564526_28565144_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28564526 - 28565144

Intron Length:

619

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAATTC

5'SS Class:

strong_major

3'SS Sequence:

GTTACTTCTTAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAC

U12 Branch Point Sequence:

TTTGCTGTTACT

Flanking Amino Acid:

QQKPGEKPIPVDQIKKEPEP

Intron Amino Acid Position:

214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

78.4

30.1

Major BPS

71.9

0.54

1.2

75.6

36.6

Major PPT

69.3

0.44

1.1

72.2

Minor 5ss

41.9

-0.9

3.2

45.7

Minor BPS

49.7

0.06

2.4

79.44

Associated Gene:

Gene:

MED6

Ensembl Gene ID:

ENSAPLG00000016074

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016769

28564395 - 28575348

10954