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Intron Name: Anas_platyrhynchos_platyrhynchos_5_28566664_28567386_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28566664 - 28567386

Intron Length:

723

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTT|GTAAGTCTT

5'SS Class:

major

3'SS Sequence:

CTCATTCTGAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

TCATTCTGAAAG

Flanking Amino Acid:

DLGSVINSRVLTAVHGIQSA

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.1

76.5

38.6

Major BPS

82.1

0.8

71.6

36.4

Major PPT

60.6

0.24

1.1

62.6

37.6

Minor 5ss

42.7

-0.8

3.1

65.3

39.9

Minor BPS

-0

1.6

58.15

43.1

Associated Gene:

Gene:

MED6

Ensembl Gene ID:

ENSAPLG00000016074

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016769

28564395 - 28575348

10954