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Intron Name: Anas_platyrhynchos_platyrhynchos_5_28652593_28653786_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28652593 - 28653786

Intron Length:

1194

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CCGTTTTGGATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAC

U12 Branch Point Sequence:

TCTTCTTTCACC

Flanking Amino Acid:

SSCLTGALGAGVLKTPSPSR

Intron Amino Acid Position:

729

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

87.9

29.3

Major BPS

77.7

0.69

30.2

Major PPT

62.2

0.28

1.1

60.2

40.5

Minor 5ss

44.7

-0.6

3.2

66.4

45.1

Minor BPS

69.4

0.59

1.7

77.59

Associated Gene:

Gene:

MAP3K9

Ensembl Gene ID:

ENSAPLG00000016153

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016857

28652111 - 28695160

43050