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Intron Name: Anas_platyrhynchos_platyrhynchos_5_28654603_28655225_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28654603 - 28655225

Intron Length:

623

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAAGGAT

5'SS Class:

major

3'SS Sequence:

GTTTGCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTACAT

U12 Branch Point Sequence:

CTTACATCAATG

Flanking Amino Acid:

FPGFTSLAEMDDEDSECLNG

Intron Amino Acid Position:

457

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

1.1

66.3

39.3

Major BPS

70.4

0.51

1.1

78.7

33.6

Major PPT

84.4

0.77

0.8

36.6

Minor 5ss

29.8

-2.3

3.7

37.4

47.4

Minor BPS

48.6

-0.2

1.9

57.71

43.8

Associated Gene:

Gene:

MAP3K9

Ensembl Gene ID:

ENSAPLG00000016153

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016857

28652111 - 28695160

43050