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Intron Name: Anas_platyrhynchos_platyrhynchos_5_28718311_28726070_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28718311 - 28726070

Intron Length:

7760

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGCGGA

5'SS Class:

major

3'SS Sequence:

CTTCTTTTGAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAC

U12 Branch Point Sequence:

TATTGACTAACT

Flanking Amino Acid:

LLGFPFTLYMALPSSMMIVA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

61.1

39.6

Major BPS

78.7

0.71

0.9

69.3

37.7

Major PPT

70.2

0.46

1.1

73.8

34.6

Minor 5ss

30.4

-2.2

3.3

34.8

43.6

Minor BPS

50.2

0.08

2.3

79.54

41.8

Associated Gene:

Gene:

PCNX1

Ensembl Gene ID:

ENSAPLG00000016331

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037820

28718158 - 28799021

80864

ENSAPLT00000027325

28718158 - 28799021

80864

ENSAPLT00000017058

28718158 - 28799021

80864

ENSAPLT00000047442

28718158 - 28799021

80864

ENSAPLT00000041777

28718158 - 28799021

80864