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Intron Name: Anas_platyrhynchos_platyrhynchos_5_28756145_28763297_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28756145 - 28763297

Intron Length:

7153

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGCAGG

5'SS Class:

major

3'SS Sequence:

TTTTCTTTAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TTTTCTTTAACA

Flanking Amino Acid:

VGGSSLHDGLGKFSSTLYET

Intron Amino Acid Position:

831

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

46.3

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

87.5

0.84

0.8

84.9

28.4

Minor 5ss

-0.5

2.6

54.1

45.1

Minor BPS

92.1

1.32

0.7

95.26

19.9

Associated Gene:

Gene:

PCNX1

Ensembl Gene ID:

ENSAPLG00000016331

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037820

28718158 - 28799021

80864