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Intron Name: Anas_platyrhynchos_platyrhynchos_5_28899102_28944021_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

28899102 - 28944021

Intron Length:

44920

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TCTATTTTACCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTTTCTCTATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

81.2

26.2

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

79.8

0.67

0.9

73.8

40.4

Minor 5ss

42.2

-0.9

2.8

52.8

38.5

Minor BPS

60.6

0.41

1.9

84.33

36.8

Associated Gene:

Gene:

SIPA1L1

Ensembl Gene ID:

ENSAPLG00000002917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002985

28899010 - 29062440

163431