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Intron Name: Anas_platyrhynchos_platyrhynchos_5_28995658_29002201_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

28995658 - 29002201

Intron Length:

6544

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTAATATGCAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTTTTTTAATA

Flanking Amino Acid:

YYYRKFFYQKEHWNYFGADE

Intron Amino Acid Position:

500

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.9

1.13

0.6

92.3

16.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

58.5

0.19

1.2

57.7

46.2

Minor 5ss

-1.7

2.7

41.8

44.8

Minor BPS

76.4

0.82

79.24

30.7

Associated Gene:

Gene:

SIPA1L1

Ensembl Gene ID:

ENSAPLG00000002917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033683

28944022 - 29062663

118642

ENSAPLT00000002985

28899010 - 29062440

163431