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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29002333_29002966_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29002333 - 29002966

Intron Length:

634

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGTGCTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAA

U12 Branch Point Sequence:

AATTCAACATAT

Flanking Amino Acid:

NYRIIFRTSELMTLRGSVLE

Intron Amino Acid Position:

544

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.9

81.8

38.5

Major BPS

74.2

0.6

0.9

75.7

Major PPT

69.5

0.44

0.9

68.7

37.2

Minor 5ss

41.1

-1

2.9

57.9

46.4

Minor BPS

39.7

-0.7

2.1

60.26

Associated Gene:

Gene:

SIPA1L1

Ensembl Gene ID:

ENSAPLG00000002917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033683

28944022 - 29062663

118642

ENSAPLT00000002985

28899010 - 29062440

163431