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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29003156_29007853_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29003156 - 29007853

Intron Length:

4698

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

ATTTTTGTATTT

Flanking Amino Acid:

EQLMKLDEQGLSYQLKVGIM

Intron Amino Acid Position:

607

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

80.7

33.8

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

89.5

0.89

0.6

84.5

23.1

Minor 5ss

35.6

-1.6

2.6

35.6

40.5

Minor BPS

48.4

-0

2.1

72.97

39.1

Associated Gene:

Gene:

SIPA1L1

Ensembl Gene ID:

ENSAPLG00000002917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033683

28944022 - 29062663

118642

ENSAPLT00000002985

28899010 - 29062440

163431