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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29008029_29015670_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29008029 - 29015670

Intron Length:

7642

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGAGAT

5'SS Class:

major

3'SS Sequence:

TCTTTAATTGAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTCTTTAATT

Flanking Amino Acid:

EKYRAQLDTKTDSTGTHSLY

Intron Amino Acid Position:

665

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.1

68.8

36.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

72.3

0.5

1.1

72.9

35.3

Minor 5ss

33.4

-1.9

3.5

43.8

44.6

Minor BPS

90.6

1.35

0.7

99.65

21.1

Associated Gene:

Gene:

SIPA1L1

Ensembl Gene ID:

ENSAPLG00000002917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033683

28944022 - 29062663

118642

ENSAPLT00000002985

28899010 - 29062440

163431