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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29015775_29017190_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29015775 - 29017190

Intron Length:

1416

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTAAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAA

U12 Branch Point Sequence:

ACTTATTTAACC

Flanking Amino Acid:

LPYTPNNKQQLLRKRHIGND

Intron Amino Acid Position:

700

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

70.4

42.5

Major BPS

79.5

0.73

0.9

36.9

Major PPT

88.4

0.86

0.9

94.6

18.5

Minor 5ss

36.1

-1.6

3.3

46.8

48.5

Minor BPS

68.9

0.57

1.5

73.53

37.3

Associated Gene:

Gene:

SIPA1L1

Ensembl Gene ID:

ENSAPLG00000002917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033683

28944022 - 29062663

118642

ENSAPLT00000002985

28899010 - 29062440

163431