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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29017349_29020639_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29017349 - 29020639

Intron Length:

3291

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCTGTT

5'SS Class:

major

3'SS Sequence:

GTATTTCTTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTTAT

U12 Branch Point Sequence:

TCTTCCTTATTC

Flanking Amino Acid:

HSPCTDSVCYSVAVTRSRDV

Intron Amino Acid Position:

752

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.2

76.2

39.9

Major BPS

78.8

0.72

67.9

40.1

Major PPT

79.9

0.67

0.8

36.2

Minor 5ss

42.8

-0.8

3.6

66.4

45.1

Minor BPS

72.1

0.67

1.5

77.93

38.5

Associated Gene:

Gene:

SIPA1L1

Ensembl Gene ID:

ENSAPLG00000002917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033683

28944022 - 29062663

118642

ENSAPLT00000002985

28899010 - 29062440

163431