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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29021217_29022320_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29021217 - 29022320

Intron Length:

1104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTTCAATTCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCAAT

U12 Branch Point Sequence:

TTTGTTTCAATT

Flanking Amino Acid:

DIKEIVKRLELVTKGCETVE

Intron Amino Acid Position:

945

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

1.1

85.7

30.3

Major BPS

76.9

0.67

1.2

31.9

Major PPT

0.65

0.9

72.8

36.1

Minor 5ss

35.8

-1.6

49.8

46.1

Minor BPS

60.8

0.42

1.6

79.05

Associated Gene:

Gene:

SIPA1L1

Ensembl Gene ID:

ENSAPLG00000002917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033683

28944022 - 29062663

118642

ENSAPLT00000002985

28899010 - 29062440

163431