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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29033817_29038650_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29033817 - 29038650

Intron Length:

4834

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGCACT

5'SS Class:

major

3'SS Sequence:

GGTGTTACAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

AAATCACTATCT

Flanking Amino Acid:

GTYRQKSMPEGFGISRRSPA

Intron Amino Acid Position:

1179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

66.3

45.2

Major BPS

81.6

0.78

0.8

24.9

Major PPT

62.4

0.28

1.1

55.8

43.5

Minor 5ss

40.2

-1.1

3.2

49.9

46.2

Minor BPS

46.4

-0.1

2.1

67.21

42.4

Associated Gene:

Gene:

SIPA1L1

Ensembl Gene ID:

ENSAPLG00000002917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033683

28944022 - 29062663

118642

ENSAPLT00000002985

28899010 - 29062440

163431