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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29038776_29041171_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29038776 - 29041171

Intron Length:

2396

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAGGTAAT

5'SS Class:

major

3'SS Sequence:

TGCTGTATTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACATCAT

U12 Branch Point Sequence:

TCTTCAGTACAT

Flanking Amino Acid:

RSEDSIADQMEPTCHLPAVS

Intron Amino Acid Position:

1221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

1.1

77.9

38.6

Major BPS

66.8

0.42

1.1

37.7

Major PPT

76.3

0.59

0.9

69.7

40.3

Minor 5ss

35.6

-1.6

3.1

42.1

44.8

Minor BPS

44.4

-0.3

2.5

70.06

46.5

Associated Gene:

Gene:

SIPA1L1

Ensembl Gene ID:

ENSAPLG00000002917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033683

28944022 - 29062663

118642

ENSAPLT00000002985

28899010 - 29062440

163431