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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29044165_29050183_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29044165 - 29050183

Intron Length:

6019

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTTCA

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTCTCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTAGAA

U12 Branch Point Sequence:

TTAGAAGCAAAT

Flanking Amino Acid:

YSLSDAVSHTSTMSSRHSAS

Intron Amino Acid Position:

1407

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

1.1

77.7

33.5

Major BPS

61.2

0.28

58.8

38.1

Major PPT

81.4

0.71

0.8

73.3

37.1

Minor 5ss

-0.4

2.5

59.7

44.7

Minor BPS

35.8

-1

2.3

56.91

44.7

Associated Gene:

Gene:

SIPA1L1

Ensembl Gene ID:

ENSAPLG00000002917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033683

28944022 - 29062663

118642

ENSAPLT00000002985

28899010 - 29062440

163431