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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29050424_29051478_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29050424 - 29051478

Intron Length:

1055

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGAATG

5'SS Class:

strong_major

3'SS Sequence:

CATTTCATTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

ATTTCATTTAAG

Flanking Amino Acid:

INSVGFMDTRKRHQSDGNEM

Intron Amino Acid Position:

1487

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

78.3

36.2

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

69.9

0.45

1.1

72.8

36.1

Minor 5ss

38.8

-1.3

3.1

40.3

Minor BPS

-0.1

2.1

64.59

42.4

Associated Gene:

Gene:

SIPA1L1

Ensembl Gene ID:

ENSAPLG00000002917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033683

28944022 - 29062663

118642

ENSAPLT00000002985

28899010 - 29062440

163431