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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29055356_29058386_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29055356 - 29058386

Intron Length:

3031

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGGTG

5'SS Class:

strong_major

3'SS Sequence:

TGCCTTACTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

TTCTTTGTAACT

Flanking Amino Acid:

SYTLGMKSLHGEFSASDSSL

Intron Amino Acid Position:

1624

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

69.6

41.1

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

71.1

0.48

0.9

62.9

38.4

Minor 5ss

-1.9

3.7

43.3

45.4

Minor BPS

62.2

0.46

82.56

39.6

Associated Gene:

Gene:

SIPA1L1

Ensembl Gene ID:

ENSAPLG00000002917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033683

28944022 - 29062663

118642

ENSAPLT00000002985

28899010 - 29062440

163431