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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29060989_29061440_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29060989 - 29061440

Intron Length:

452

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

CTACTTTTAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTAAAAT

U12 Branch Point Sequence:

CTACTTTTAACA

Flanking Amino Acid:

QLSAQIKPYTGKESPPTLAS

Intron Amino Acid Position:

1711

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

83.2

30.8

Major BPS

52.8

0.07

1.3

61.7

41.5

Major PPT

76.6

0.6

0.9

72.8

Minor 5ss

34.6

-1.8

2.7

41.5

Minor BPS

0.5

1.2

68.92

37.5

Associated Gene:

Gene:

SIPA1L1

Ensembl Gene ID:

ENSAPLG00000002917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033683

28944022 - 29062663

118642

ENSAPLT00000002985

28899010 - 29062440

163431