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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29061523_29062296_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

29061523 - 29062296

Intron Length:

774

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACGTT

5'SS Class:

strong_major

3'SS Sequence:

CCTTGCACCCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTGTAC

U12 Branch Point Sequence:

TTTCCTTGCACC

Flanking Amino Acid:

LKMLQEDLRKEKEDKASLQA

Intron Amino Acid Position:

1739

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

78.6

35.9

Major BPS

61.6

0.29

1.4

63.4

Major PPT

56.8

0.15

53.2

35.7

Minor 5ss

41.6

-0.9

3.6

64.1

47.4

Minor BPS

54.9

0.13

1.9

72.68

38.2

Associated Gene:

Gene:

SIPA1L1

Ensembl Gene ID:

ENSAPLG00000002917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033683

28944022 - 29062663

118642

ENSAPLT00000002985

28899010 - 29062440

163431