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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29300535_29301935_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29300535 - 29301935

Intron Length:

1401

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCGTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAGGTAT

U12 Branch Point Sequence:

TTCTCGTTCACA

Flanking Amino Acid:

LMKNLSIEDPGEAIHLGSLI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.93

0.9

75.7

36.7

Major BPS

42.4

-0.4

1.5

35.1

43.5

Major PPT

80.7

0.69

0.8

75.3

33.2

Minor 5ss

36.1

-1.6

3.3

47.1

48.3

Minor BPS

0.15

2.5

74.7

43.3

Associated Gene:

Gene:

RGS6

Ensembl Gene ID:

ENSAPLG00000003719

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033291

29211133 - 29366082

154950

ENSAPLT00000003852

29111890 - 29366082

254193