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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29304147_29306752_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29304147 - 29306752

Intron Length:

2606

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGGCTA

5'SS Class:

major

3'SS Sequence:

TTTCTCCCTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

CTGTCTGTAATT

Flanking Amino Acid:

NCWEPENTDYAIYLCKRTMQ

Intron Amino Acid Position:

132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

67.5

39.2

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

83.8

0.76

0.6

82.3

22.4

Minor 5ss

-2.4

3.3

35.2

42.4

Minor BPS

57.1

0.3

74.76

43.2

Associated Gene:

Gene:

RGS6

Ensembl Gene ID:

ENSAPLG00000003719

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033291

29211133 - 29366082

154950

ENSAPLT00000003852

29111890 - 29366082

254193