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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29309863_29312809_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29309863 - 29312809

Intron Length:

2947

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTGTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TGTGTGATGACT

Flanking Amino Acid:

FIFMQAEAQVKIDRKKDKTE

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

80.7

33.7

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

89.9

0.9

0.7

29.4

Minor 5ss

33.7

-1.9

2.8

42.7

38.3

Minor BPS

44.5

-0.3

2.3

68.13

42.9

Associated Gene:

Gene:

RGS6

Ensembl Gene ID:

ENSAPLG00000003719

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033291

29211133 - 29366082

154950

ENSAPLT00000003852

29111890 - 29366082

254193