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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29312892_29313427_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29312892 - 29313427

Intron Length:

536

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAAGCTC

5'SS Class:

major

3'SS Sequence:

CATCTCTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

CTTTTTTTAACC

Flanking Amino Acid:

RAFWDVHRPVPGCVNTTEMD

Intron Amino Acid Position:

207

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

62.9

41.6

Major BPS

87.3

0.93

0.8

36.5

Major PPT

83.6

0.75

0.8

80.6

30.9

Minor 5ss

34.8

-1.7

3.5

47.1

43.1

Minor BPS

78.8

0.88

1.1

81.25

33.5

Associated Gene:

Gene:

RGS6

Ensembl Gene ID:

ENSAPLG00000003719

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033291

29211133 - 29366082

154950

ENSAPLT00000003852

29111890 - 29366082

254193