Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_29313503_29314675_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29313503 - 29314675

Intron Length:

1173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TGCTTCCCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCATAAT

U12 Branch Point Sequence:

AGGCCATAATCT

Flanking Amino Acid:

RMKNPQKVKKSVYGVTEESQ

Intron Amino Acid Position:

232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

1.2

78.8

38.3

Major BPS

62.9

0.32

1.2

63.9

38.4

Major PPT

79.9

0.67

0.8

73.7

31.3

Minor 5ss

39.2

-1.2

2.8

49.7

46.6

Minor BPS

42.7

-0.4

44.3

Associated Gene:

Gene:

RGS6

Ensembl Gene ID:

ENSAPLG00000003719

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033291

29211133 - 29366082

154950

ENSAPLT00000003852

29111890 - 29366082

254193