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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29344942_29366031_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29344942 - 29366031

Intron Length:

21090

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCTGTT

5'SS Class:

major

3'SS Sequence:

TCCCTTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

TTCTTCTCACTG

Flanking Amino Acid:

YQDLLLAKKKGKSLTSKRLT

Intron Amino Acid Position:

457

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

1.1

77.9

36.9

Major BPS

0.87

0.8

85.6

Major PPT

81.9

0.72

0.7

76.6

25.5

Minor 5ss

0.03

2.9

75.5

40.6

Minor BPS

49.2

-0.1

1.9

58.48

44.1

Associated Gene:

Gene:

RGS6

Ensembl Gene ID:

ENSAPLG00000003719

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033291

29211133 - 29366082

154950

ENSAPLT00000003852

29111890 - 29366082

254193