Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_29405641_29407065_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29405641 - 29407065

Intron Length:

1425

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

AACCCTGCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTCCAA

U12 Branch Point Sequence:

TCTCCAACAACC

Flanking Amino Acid:

CSLCGTSENDDQLLFCDDCD

Intron Amino Acid Position:

338

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

24.8

Major BPS

55.5

0.14

1.3

66.7

39.7

Major PPT

62.4

0.28

0.9

37.5

Minor 5ss

43.1

-0.8

3.1

62.8

Minor BPS

46.5

-0.2

62.87

41.8

Associated Gene:

Gene:

DPF3

Ensembl Gene ID:

ENSAPLG00000004675

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004893

29404445 - 29494144

89700