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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29457143_29460779_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29457143 - 29460779

Intron Length:

3637

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

CTTGTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

ATAATGTTAACA

Flanking Amino Acid:

PTWKKIFQKNARGSGGGRRR

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

84.3

27.2

Major BPS

0.52

1.1

77.7

35.3

Major PPT

83.3

0.75

0.8

77.1

31.6

Minor 5ss

47.2

-0.3

2.8

66.2

38.1

Minor BPS

53.4

0.1

2.1

67.09

Associated Gene:

Gene:

DPF3

Ensembl Gene ID:

ENSAPLG00000004675

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023452

29430810 - 29494193

63384