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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29566766_29570759_R

Intron Information:

Intron Rank:

141154

Intron Class:

major

Intron Phase:

Intron Coordinates:

29566766 - 29570759

Intron Length:

3994

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGCAC

5'SS Class:

major

3'SS Sequence:

TTTCCCTCCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTTCCCTCCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

63.9

42.4

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

81.8

0.72

0.7

76.5

25.7

Minor 5ss

29.7

-2.3

3.5

40.5

Minor BPS

59.9

0.31

77.44

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023271

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043818

29566536 - 29571629

5094