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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29670078_29671149_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

29670078 - 29671149

Intron Length:

1072

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTATGTATC

5'SS Class:

weak_major

3'SS Sequence:

TTTGTTGTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAG

U12 Branch Point Sequence:

TTTCAGTTGACT

Flanking Amino Acid:

VSFYTRKDGQLIYTPFTEET

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.1

71.2

38.6

Major BPS

67.2

0.43

1.5

77.4

37.3

Major PPT

81.5

0.71

0.9

77.2

37.1

Minor 5ss

49.3

-0

2.5

72.8

36.5

Minor BPS

54.2

0.21

2.3

82.07

39.1

Associated Gene:

Gene:

PSEN1

Ensembl Gene ID:

ENSAPLG00000006843

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043266

29666819 - 29682704

15886

ENSAPLT00000007129

29665034 - 29682704

17671