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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29672960_29674710_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29672960 - 29674710

Intron Length:

1751

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTCCAT

U12 Branch Point Sequence:

TTTTTTTTTTCT

Flanking Amino Acid:

LLFFFSFIYLGEVFKTYNVA

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

71.3

34.5

Major BPS

53.3

0.08

1.4

64.2

Major PPT

1.06

0.5

96.7

11.4

Minor 5ss

29.3

-2.4

3.3

29.9

43.1

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

PSEN1

Ensembl Gene ID:

ENSAPLG00000006843

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043266

29666819 - 29682704

15886

ENSAPLT00000007129

29665034 - 29682704

17671