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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29677245_29678440_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29677245 - 29678440

Intron Length:

1196

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTATA

5'SS Class:

major

3'SS Sequence:

TTGTTTTTAACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAA

U12 Branch Point Sequence:

TTGTTTTTAACA

Flanking Amino Acid:

ETLFPALIYSSTMVWLVNMA

Intron Amino Acid Position:

290

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.55

1.1

76.5

Major BPS

73.3

0.58

0.9

63.4

35.6

Major PPT

83.7

0.76

0.9

35.4

Minor 5ss

36.8

-1.5

2.9

52.2

44.4

Minor BPS

79.5

0.92

82.37

32.8

Associated Gene:

Gene:

PSEN1

Ensembl Gene ID:

ENSAPLG00000006843

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043266

29666819 - 29682704

15886

ENSAPLT00000007129

29665034 - 29682704

17671