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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29678528_29679397_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29678528 - 29679397

Intron Length:

870

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTATTATTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TAGATTTTAAAC

Flanking Amino Acid:

ASKNSTYDKQANQTQNGDAE

Intron Amino Acid Position:

319

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

0.81

0.8

78.2

39.9

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

55.8

0.16

1.4

61.02

38.1

Associated Gene:

Gene:

PSEN1

Ensembl Gene ID:

ENSAPLG00000006843

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043266

29666819 - 29682704

15886

ENSAPLT00000007129

29665034 - 29682704

17671